Package: kaos 0.1.2
kaos: Encoding of Sequences Based on Frequency Matrix Chaos Game Representation
Sequences encoding by using the chaos game representation. Löchel et al. (2019) <doi:10.1093/bioinformatics/btz493>.
Authors:
kaos_0.1.2.tar.gz
kaos_0.1.2.zip(r-4.7)kaos_0.1.2.zip(r-4.6)kaos_0.1.2.zip(r-4.5)
kaos_0.1.2.tgz(r-4.6-any)kaos_0.1.2.tgz(r-4.5-any)
kaos_0.1.2.tar.gz(r-4.7-any)kaos_0.1.2.tar.gz(r-4.6-any)
kaos_0.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
kaos/json (API)
| # Install 'kaos' in R: |
| install.packages('kaos', repos = c('https://hfloechel.r-universe.dev', 'https://cloud.r-project.org')) |
- HIV - Complete HIV 1 genome
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:906f870523. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 125 | ||
| source / vignettes | OK | 160 | ||
| linux-release-x86_64 | OK | 172 | ||
| macos-release-arm64 | OK | 168 | ||
| macos-oldrel-arm64 | OK | 180 | ||
| windows-devel | OK | 81 | ||
| windows-release | OK | 83 | ||
| windows-oldrel | OK | 81 | ||
| wasm-release | OK | 100 |
Exports:cgrcgr.plotcgr.resvectorize
Dependencies:clicpp11farverggplot2gluegtableisobandlabelinglifecyclemagrittrplyrR6RColorBrewerRcppreshape2rlangS7scalesstringistringrvctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Chaos Game Representation Object | cgr |
| Plot from a CGR object | cgr.plot |
| Produces a new matrix with new resolution | cgr.res |
| Complete HIV 1 genome | HIV |
| Vectorizes the FCGR | vectorize |
